Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914247.1_cds_XP_016464264.1_57317
CDS Infomation

[gene=LOC107787236] [db_xref=GeneID:107787236] [protein=protein INVOLVED IN DE NOVO 2-like] [protein_id=XP_016464264.1] [location=complement(join(26856..27074,29579..29788,30111..30398,30502..30591,31131..31312,31390..32320))] [gbkey=CDS]
Sequence

ATGGATCATAGCTCCGGGGAAGACACTGATATAAGTGAATCAGAGATCGAAGAATATGAA
GAAAAATCTTATGAAGATCTGAAGAGAGGAAATCACTCTCTTAAAATATCAGATGTGGCA
TACACTTGCCCCTATTGTCCAAAGAAAAGGAAGCGTGACTTTGGTTACAAGGAACTTGTG
CAGCATGCAAGTGGGGTGGGAAGCGGTAATTCTAATAAGAGAACTGCAAGAGACAAGGCG
AATCATCTTGCATTGGCAAAGTACTTGGAAAATGATGTAGTAGTTGCTGGTGATTCATCT
AATGATTCATCTAAACCTGATGCCAAGCCGGATCCTCAAGCTGACCCTCTTGCGGATCAT
GACCGTGATGAGATGTTTGTCTGGCCTTGGATTGGGATTGTTGTGAATATTCTCACTGAA
TATAAGGATGGACGCTATGTAGGAGAAAGTGGTTCTAAGCTGAGGGATCAGTTGGCACGG
AGAGGTTTCAATCCTACACGAGTACGTCCTCTATGGAATTATCAAGGCCATTCTGGAACT
GCTCTTGTTGAATTCAACAAAGACTGGTCCGGATTTGGTAACGCAATGTCATTTGAGAAG
GCTTATGAGGCTGACCATCATGGCAAGAGGGAATGGAAAGCCAACATTGGTAAAAAGTCT
GATCTGTATGCTTGGATTGCTCGTGCAGATGACTATAAAGCTCTTAACATCGTCGGTGAA
AATCTCCGCAAGGTTGGAGACCTTAGAACCATTTCTGATATCATGGAAGAAGAAGCTCGG
AAGACGAATAAGCTCGTTTCTAATTTGACAAATGTTATTGAAGTCAAGAAGTTACACCTA
AAGGAGATGGAGAACAAATTTAAGGAGACTGCACAGTCTTTGCAACAGTTGGTTGAAGAA
AAAGATAAACTGCATCAAGCGTACAATGAAGAGATAAGAAAAATCCAGTCTAGTGCACGT
GATCATTTTCAGAAGATATTTAATGATCATGAAAAGTTGAAATTGCAATTGGAATCTCAA
AAGAAAGAGCTTGAGCTCCGAGGTAGAGAATTGGAGCAACGTGAGGCCAAAAATGAAAGT
GATAGGAAGAAGCTGTCTGAGGAGCTTGAACAGAATGCTGTTCTAAATACCTCACTTAGT
GCCGCTGCTGAAGAGCAAAGAAAGGTCGATGAAAAAGTACTGAAATTGGCTGAAGAGCAG
AAGAGGCAAAAAGAAGATCTTCATAAAAGAATAATTCATCTGGAGAAACAACTTGATGCG
AAACAAGCGGTAGAGCTGGAAATTGAGCAGTTGAGAGGGTCATTGAAGGTGATGAAGCAT
ATTGAAGATGAAGGTGATCAAGAAGTATTGAAAAAAGTGGACACACTCCTTAAAAGTTTA
AGAGAAAAGGAAGAAGAATATGAAGGTTTGGAAGCATTAAATCAAACTCTCATCGTGAAG
GAAAGAAACAGTAACGATGAGCTGCAAGATGCTCGAAAAGAGTTGGTTAATGGCTTGAAG
GAACTACCAAGAGTTGGTCCAATTGGTGTTAAGAGGATGGGGGAGCTCGACAATAGACCA
TTCCATGAAGCAATGAAGAGAAAGTATAATGAGTCAGAAGCAGATGAAAGAGCTACGGAA
CTATGCTCATTGTGGGAGGAGTACCTTAGAGATCCTGGATGGCATCCCATTAAAGTTGTC
ACGGTTAACGGGAAACTTGAGAATGTGATAGACGATGAAGATGAAAAACTGAAAGACTTG
AAGAGAAACTATGGTGAGGACGTGTACAAAGCTGTTACAGCAGCTTTGATAGAGATAAAT
GATTACAACCCGAGTGGAAGATACATCATCTCGGAGCTCTGGAACTATGCAGTAAATCAG
AAGGCTACTTTGGAGGAGGGAGTAACTGTGTTGCTAAACCTGTGGAAAAAGAAGAGATGA

Peptide Sequence

PEP ID

XP_016464264.1
PEP Infomation

PREDICTED: protein INVOLVED IN DE NOVO 2-like [Nicotiana tabacum]
Sequence

MDHSSGEDTDISESEIEEYEEKSYEDLKRGNHSLKISDVAYTCPYCPKKRKRDFGYKELV
QHASGVGSGNSNKRTARDKANHLALAKYLENDVVVAGDSSNDSSKPDAKPDPQADPLADH
DRDEMFVWPWIGIVVNILTEYKDGRYVGESGSKLRDQLARRGFNPTRVRPLWNYQGHSGT
ALVEFNKDWSGFGNAMSFEKAYEADHHGKREWKANIGKKSDLYAWIARADDYKALNIVGE
NLRKVGDLRTISDIMEEEARKTNKLVSNLTNVIEVKKLHLKEMENKFKETAQSLQQLVEE
KDKLHQAYNEEIRKIQSSARDHFQKIFNDHEKLKLQLESQKKELELRGRELEQREAKNES
DRKKLSEELEQNAVLNTSLSAAAEEQRKVDEKVLKLAEEQKRQKEDLHKRIIHLEKQLDA
KQAVELEIEQLRGSLKVMKHIEDEGDQEVLKKVDTLLKSLREKEEEYEGLEALNQTLIVK
ERNSNDELQDARKELVNGLKELPRVGPIGVKRMGELDNRPFHEAMKRKYNESEADERATE
LCSLWEEYLRDPGWHPIKVVTVNGKLENVIDDEDEKLKDLKRNYGEDVYKAVTAALIEIN
DYNPSGRYIISELWNYAVNQKATLEEGVTVLLNLWKKKR

Transcript Sequence

Gene sequence data has not been registered.